BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023H01LP1|AL428122
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1521 1358 0.0
>3x_Contig1521
Length = 8057
Score = 1358 bits (672), Expect = 0.0
Identities = 749/790 (94%)
Strand = Plus / Plus
Query: 1 agttgttttttatattttyagttggttggaaacacgatatagcccattcttttcaaatag 60
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3403 agttgttttccatatttccagttggttggaaacacgatatagcccattcttttcaaatag 3462
Query: 61 gcatacacaaagaactcatccagttcatcttgagatttgaagaaagaatagacatcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3463 gcatacacaaagaactcatccagttcatcttgagatttgaagaaagaatagacatcttgc 3522
Query: 121 aatgacaatwagtactcttccttttcaccgttaatacccaaatyaataattggtgaaaca 180
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3523 aatgacaataagtactcttccttttcaccgttaatacccaaatcaataattggtgaaaca 3582
Query: 181 cttcctctttcgactaagtacacaaattcatgaaaytkcwaggttaaggtttygttygaa 240
||||||||||||||||||||||||||||||||||| | | ||||||||||| || |||
Sbjct: 3583 cttcctctttcgactaagtacacaaattcatgaaactgcaaggttaaggttccgtccgaa 3642
Query: 241 ttaggactaccaacggtattggtaaaagtaccttttggaaacttaatagttgcaacatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3643 ttaggactaccaacggtattggtaaaagtaccttttggaaacttaatagttgcaacatgt 3702
Query: 301 aaattaagwttwttwtwtkctttawtttgattcttaatgatagttcccctgtcaggttgt 360
|||| ||| | | | | | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 3703 aaatcaagatcataatatgccttaacttgattcttaatgatagttcccctgtcaggttgt 3762
Query: 361 cgaagaacatcaaacatcactttcttagccttgawaagcatcgatccttgcataccagta 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3763 cgaagaacatcaaacatcactttcttagccttgaaaagcatcgatccttgcataccagta 3822
Query: 421 ccatctggtttgttatcttttttatcttgcagtggtatcacattcttattatcaccaata 480
|||||||| | || |||||||| | || ||||||||||||||||||||||||||||||||
Sbjct: 3823 ccatctggctcgtaatctttttcacctcgcagtggtatcacattcttattatcaccaata 3882
Query: 481 attttwgttgctagcgaccaatcttgaagcaattcatccccttccacatctgaatcattg 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 attttagttgctagcgaccaatcttgaagcaattcatccccttccacatctgaatcattg 3942
Query: 541 aacgtttcttcattgtcggacatgccagactatcttgtgattttgatgctccttgttgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3943 aacgtttcttcattgtcggacatgccagactatcttgtgattttgatgctccttgttgta 4002
Query: 601 acaaaacaaacggtttcacccacactagtaatggaaaawwagagcagctacacgtctgta 660
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4003 acaaaacaaacggtttcacccacactagtaatggaaaaaaagagcagctacacgtctgta 4062
Query: 661 ccgtatattgwtttktttgwtwactggccgttgtccgcgtaagtcacaaaatttctgtga 720
|||||||||| || ||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 4063 ccgtatattgaattgattgataactggccgttgtccgcgtaagtcacaaaatttctgtga 4122
Query: 721 agttgttgttagtagtactgaacatcgtatttyctcatctcatcacagtgagcgatttga 780
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4123 agttgttgttagtagtactgaacatcgtatttcctcatctcatcacagtgagcgatttga 4182
Query: 781 tatatgttga 790
||||||||||
Sbjct: 4183 tatatgttga 4192
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6196
Number of Sequences: 1807
Number of extensions: 6196
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 16
effective length of query: 774
effective length of database: 10,329,639
effective search space: 7995140586
effective search space used: 7995140586
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)